BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A12SP1|AL425974
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1668 1585 0.0
>3x_Contig1668
Length = 13429
Score = 1585 bits (799), Expect = 0.0
Identities = 800/801 (99%)
Strand = Plus / Minus
Query: 1 gatcaaagattctattgccaatagaaaccctttcactgcccaaaaattgatgcgttgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7501 gatcaaagattctattgccaatagaaaccctttcactgcccaaaaattgatgcgttgctc 7442
Query: 61 gatctccgttccacttgcataggaacagaaagcctataatcagaatttcttttaacaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7441 gatctccgttccacttgcataggaacagaaagcctataatcagaatttcttttaacaccc 7382
Query: 121 tagttaattcaatttctcacataagcatactctctatcaagaatattgttcaacttaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7381 tagttaattcaatttctcacataagcatactctctatcaagaatattgttcaacttaccc 7322
Query: 181 tcgaactatttcgacaggtcgagcattttatattgatcaattgattccgataatttgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7321 tcgaactatttcgacaggtcgagcattttatattgatcaattgattccgataatttgttt 7262
Query: 241 gagtgaacaaaaatcccaaccaagagacggacactatcttaattaaactcaatcagcccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7261 gagtgaacaaaaatcccaaccaagagacggacactatcttaattaaactcaatcagcccc 7202
Query: 301 ttgtccagccaatatttacagttctatgtatctcttttaagaattataggtttttctgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7201 ttgtccagccaatatttacagttctatgtatctcttttaagaattataggtttttctgta 7142
Query: 361 ccactataagcacataaaatttacattgctgtaaccccgtgagtatgtwagttgagtgtt 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7141 ccactataagcacataaaatttacattgctgtaaccccgtgagtatgtaagttgagtgtt 7082
Query: 421 aatatatatattttctacagtctacagcgaaccattactaatacccaagtactcctctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7081 aatatatatattttctacagtctacagcgaaccattactaatacccaagtactcctctta 7022
Query: 481 tattctttcctttgctgggaataggtgtgtcacatgaaaagacgttctcaacgtctggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7021 tattctttcctttgctgggaataggtgtgtcacatgaaaagacgttctcaacgtctggtg 6962
Query: 541 ttcccaaccacaatcagagagatttccggcatttttccaatatggaacttcagttgattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6961 ttcccaaccacaatcagagagatttccggcatttttccaatatggaacttcagttgattt 6902
Query: 601 ctgagtatttaaaaaaatgataaaaatgtgtagcacttcgaattagtgataacctttttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6901 ctgagtatttaaaaaaatgataaaaatgtgtagcacttcgaattagtgataacctttttg 6842
Query: 661 gactgagaaataaaattgatttgtcagtggggctcaaagggtcaaacgacacggcagttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6841 gactgagaaataaaattgatttgtcagtggggctcaaagggtcaaacgacacggcagttg 6782
Query: 721 ttatgtctgataaccatgatcaaagccgtgatagtgctcctgaccgtgggggtagcgaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6781 ttatgtctgataaccatgatcaaagccgtgatagtgctcctgaccgtgggggtagcgaat 6722
Query: 781 caagtgagaacggtgcaagcg 801
|||||||||||||||||||||
Sbjct: 6721 caagtgagaacggtgcaagcg 6701
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6434
Number of Sequences: 1807
Number of extensions: 6434
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)